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Attending: Jason, Scott, Greg

Agenda:

  • Email from Jim MacDonald? about collaboration with Bioconductor SNP chip efforts

    ACTION: Ross should talk to vince about having the SNP-Call code from Bioconductor generate geneBase objects, including how to set up the interaction between the groups.

  • Greg's work on data import for GeneticsBase

    Greg added files for importing data files, including pfizer's internal format, basic ped, and the hapmap ped format.

Side Note:

Greg has a project called Chaco which allows definition of computational modules associated with enough machine-readable metadata so that wrappers can be automatically instantiated into common UI tools. It is sort of WebServices?++ or Computational Legos (depending on your point of view). Information (including alpha source code) is available at http://research.warnes.net/projects/chaco.


 

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